Skip to main content

Package to extract summary statistics from electrophysiological data.

Project description

PyPI version Contributions welcome Tests codecov GitHub license Documentation Status

EphysPy

Package to extract electrophysiological features from current clamp experiments.

This package provides an API to extract a multitude of features from voltage clamp recordings with the help of the AllenSDK.

Installation

The package can be installed via pip install ephyspy. Alternatively, clone the package with https://github.com/berenslab/ephyspy.git and install using pip via pip install -e ./ephyspy.

Getting started

To get started see example.ipynb.

Documentation

All documentation can be found here.

Acknowledgments

This package builds on previous work by @ybernaerts, which was part of the Phenotypic variation of transcriptomic cell types in mouse motor cortex atlas and the AllenSDK.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

ephyspy-0.0.8.tar.gz (18.0 MB view details)

Uploaded Source

Built Distribution

ephyspy-0.0.8-py3-none-any.whl (85.3 kB view details)

Uploaded Python 3

File details

Details for the file ephyspy-0.0.8.tar.gz.

File metadata

  • Download URL: ephyspy-0.0.8.tar.gz
  • Upload date:
  • Size: 18.0 MB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: uv/0.6.3

File hashes

Hashes for ephyspy-0.0.8.tar.gz
Algorithm Hash digest
SHA256 e3261193091e41368e12e744efe615bfa54955816a37a8dd53a3dd54fccc879e
MD5 f27b22c7d3afe1ffdcdbb850fb2addfb
BLAKE2b-256 243887b6ea031260683c229da6df74717ceef8d0a652af72d426e2fae7599b9d

See more details on using hashes here.

File details

Details for the file ephyspy-0.0.8-py3-none-any.whl.

File metadata

  • Download URL: ephyspy-0.0.8-py3-none-any.whl
  • Upload date:
  • Size: 85.3 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: uv/0.6.3

File hashes

Hashes for ephyspy-0.0.8-py3-none-any.whl
Algorithm Hash digest
SHA256 7e481a2a2fafcc673010acadff73f9512488cb98f7a83d8a7f587131a318364a
MD5 805eded41b9e409abac9738c00dcd3d0
BLAKE2b-256 72bbad30b767edab136c5ab5e75a32d14e42b612abe2e2252722f4e7b75e3ac3

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page