Optimizing and predicting performance of DNA methylation biomarkers using sequence methylation density information.
Project description
EpiClass
Quick Installation:
note: built with python==3.7 recommend installing in conda environment first.
conda create -n name python==3.7 pip
pip install EpiClass
readthedocs.com documentation:
https://epiclass.readthedocs.io/en/latest/index.html
check out the preprint for more information:
https://doi.org/10.1101/579839
For a deeper look into the code and generating the figures in the manuscript, check out the vignette on GitHub:
https://github.com/bmill3r/EpiClass/blob/master/manuscript_figures/vignette/README_Vignette.ipynb
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