Process genomic sequences.
Project description
#eSeq: process sequence
introduction
The tool known as eSeq can offer methods for process various sequences. Those sequence could be DNA, RNA, amino acid sequence, etc.
- Detect specific sequence, namely palindromic, similarity etc.
- Iterator of sequence
- Trim adapter from sequence.
- Detect motif
quick installation
pip install eseq
devlopment
Launch virtual environment.
git clone git@github.com:Tiezhengyuan/bio_sequence.git
cd bio_sequence
source venv/bin/activate
Run unit tests
pytest tests/unittests
Quick tour
import eseq
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