Project description

Exdyn

Exdyn is intended to analyze colocalization relation ships between single cell transcriptomes, integrating them with spatial transcriptome.

You can install exdyn using pip command from your shell.

pip install exdyn  torchtext==0.6.0

You need to prepare AnnData objects which includes spliced and unspliced transcript counts for single cell transcriptome respectively. You can see the usage in IPython Notebook1 and IPython Notebook2.

These details have not been verified by PyPI

View statistics for this project via Libraries.io, or by using our public dataset on Google BigQuery

This version

0.0.2

Mar 13, 2024

0.0.1

Mar 13, 2024

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Uploaded Mar 13, 2024 Source

Uploaded Mar 13, 2024 Python 3

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