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Python API for Mentalab biosignal aquisition devices

Project description

.. image:: logo.png :scale: 100 % :align: left

========================= explorepy overview

explorepy is an open-source Python API designed to collect and process ExG data using Mentalab's Explore device. Amongst other things, explorepy provides the following features:

  • Real-time streaming of ExG, orientation and environmental data.
  • Real-time visualization of ExG, orientation and environmental data.
  • Data recording in CSV and BDF+ formats.
  • Integration with LabStreaming Layer.
  • Electrode impedance measurements.
  • Explore device configuration.

Quick installation

For Windows users, the best way to install explorepy is to download the latest explorepy version from the release page <https://github.com/Mentalab-hub/explorepy/releases>_. Please note that dependencies will install automatically from the release page.

For other operating systems, or to build the package manually on Windows, please refer to the information below.

Requirements

  • Python 3.10 to Python 3.12.
  • Visual Studio 2015 community edition (Windows only. For package building).
  • Bluetooth header files (Linux only. Use: sudo apt-get install libbluetooth-dev).

Detailed installation instructions can be found on the installation page <https://explorepy.readthedocs.io/en/latest/installation.html>_.

To install explorepy from PyPI run: ::

pip install explorepy

To install the latest development version (git must be installed before running this command): ::

pip install git+https://github.com/Mentalab-hub/explorepy

Get started

CLI command

To check explorepy is running use: :: explorepy acquire -n Explore_XXXX

For help, use: :: explorepy -h

Python code

In Python you can connect to the Explore device and print data using:

::

import explorepy
explorer = explorepy.Explore()
explorer.connect(device_name="Explore_XXXX")  # Put your device Bluetooth name
explorer.acquire()

You can also visualize the data in real-time.

::

import explorepy
explorer = explorepy.Explore()
explorer.connect(device_name="Explore_XXXX")  # Put your device Bluetooth name

Documentation

For full API documentation, visit: https://explorepy.readthedocs.io/.

Troubleshooting

If you are having problems, please check the troubleshooting <https://explorepy.readthedocs.io/en/latest/installation.html#troubleshooting>_ section of the documentation.

If you are still having problems, send us your error log via Sentry (note: Explorepy will send the log automatically once you have provided permission), or send us the log file via email to support@mentalab.com. The log file is usually found under:

  • Windows: <Windows Drive>:\Users\<USER_NAME>\AppData\Local\mentalab\explorepy\Logs\explorepy.log
  • Ubuntu: /home/<USER_NAME>/.cache/explorepy/log/explorepy.log
  • Mac OS: /Users/<USER_NAME>/Library/Logs/explorepy/explorepy.log

You can also create a new issue in the GitHub repository.

Authors

  • Mohamad Atayi_
  • Salman Rahman_
  • Andrea Escartin_
  • Sonja Stefani_
  • Alex Platt_
  • Andreas Gutsche_
  • Masooma Fazelian_
  • Philipp Jakovleski_
  • Florian Sesser_
  • Sebastian Herberger_

.. _Mohamad Atayi: https://github.com/bmeatayi .. _Salman Rahman: https://github.com/salman2135 .. _Andrea Escartin: https://github.com/andrea-escartin .. _Sonja Stefani: https://github.com/SonjaSt .. _Alex Platt: https://github.com/Nujanauss .. _Andreas Gutsche: https://github.com/andyman410 .. _Masooma Fazelian: https://github.com/fazelian .. _Philipp Jakovleski: https://github.com/philippjak .. _Florian Sesser : https://github.com/hacklschorsch .. _Sebastian Herberger: https://github.com/SHerberger

License

This project is licensed under the MIT <https://github.com/Mentalab-hub/explorepy/blob/master/LICENSE>_ license. You can reach us at contact@mentalab.com.

Changelog

3.1.0 (8.11.2024)

  • Add USB streaming support
  • Improve BT communication

3.0.1 (28.08.2024)

  • Improve device connectivity
  • Add text marker support

3.0.0 (7.6.2024)

  • Improve Mac OSX support
  • Add Support for Explore Pro
  • Robust data parsing

2.0.0 (5.1.2024)

  • Add Mac OSX support
  • Remove browser based visualization support
  • Update build script for docs

1.8.2 (28.8.2023)

  • Improve explore mock device
  • Add yaml file for RTD build

1.8.1 (11.7.2023)

  • Bugfix record data
  • Add dummy packets for CI/CD pipeline
  • Add mock device

1.8.0 (27.2.2023)

  • Add support for explore+ 16 ch device
  • Unit test integration with CI/CD
  • Repair CSV from binary data
  • Save current device settings on disconnection, restore them on demand
  • Receive external triggers from LSL

1.7.0 (21.12.2022)

  • Add suppport for new explore+ 32 ch device
  • Sorted timestamps in CSV
  • Settings file to preserve experiment settings

1.6.3 (25.10.2022)

  • Add new 8 channel Explore+ device

1.6.2 (7.09.2022)

  • Change EDF file extension
  • Add dataset export feature for EEGLab
  • Bugfix recording

1.6.1 (14.06.2022)

  • Improve EDF file timing with PyEDFlib
  • Fix Bokeh import error
  • Add custom analysis script for 4 channel P300 experiment

1.6.0 (23.11.2021)

  • Remove dependency on Pybluez
  • Add SSVEP offline experiment
  • Add P300 example
  • Update LSL stream names
  • Fixing some bugs

1.5.2 (22.09.2021)

  • Hotfix for impedance disable bug

1.5.1 (21.7.2021)

  • Hotfix for installation bug

1.5.0 (20.7.2021)

  • Push to LSL button in the GUI
  • Search free port for initialization of the dashboard
  • Update installation procedure for Windows
  • Fixing some minor bugs

1.4.0 (31.03.2021)

  • Baseline correction feature in the visualization
  • Error logging system (Logging and Sentry)
  • Fix a bug of SDK in MacOS
  • Change the default Bluetooth interface to SDK
  • Improved FFT visualization
  • More precise local time in all OSes

1.3.0 (30-12-2020)

  • GUI resizing for different screen resolutions
  • Added event button to dashboard
  • Improvement of impedance measurement
  • Fixed minor bugs

1.2.0 (25-11-2020)

  • Standalone installer for Windows OS
  • Fix bugs in ExploreSDK
  • Create new file on device settings change

1.1.0 (27-08-2020)

  • MacOS support
  • Fix bugs
  • Add module disable/enable feature
  • Enhanced user interface
  • Add unique lsl stream names

1.0.0 (22-05-2020)

  • Add ExploreSDK as the Bluetooth interface
  • New dark theme
  • Record module in dashboard
  • Improvement in visualization perfrmance
  • CLI migration to Click

0.6.0 (17-02-2020)

  • EDF (BDF+) file writer
  • Channel disable/enable feature
  • Calibration of movement sensors
  • Extraction of physical orientation (angle and rotation)
  • Soft marker event
  • Visualization performance enhancement
  • Automatic number of channel and sampling rate detection
  • Exception handling improvement
  • Command for soft reset of Explore
  • Marker visualization

0.5.0 (25-11-2019)

  • Impedance measurement
  • Send commands to device
  • Configuring device settings
  • Update push to lsl feature

0.4.0 (09-09-2019)

  • Added marker feature
  • Timer based recording
  • Fixed a bug in csv file writer
  • Fixed a bug in device reconnect
  • Improved performance of dashboard visualization

0.3.1 (28-05-2019)

  • Fixed a bug in 8-channel ExG packet conversion
  • Fixed a minor bug in the record function
  • Updated the documentation

0.3.0 (10-05-2019)

  • Explore dashboard
  • Real-time visualization of ExG and orientation signal
  • Device information in Dashboard
  • Environmental data (battery, temperature and light)
  • Real-time bandpass filter
  • New packet structures (ADS1294R & ADS1298R)
  • Heart rate estimation and R-peaks detector in dashboard

0.2.0 (2019-03-08)

  • Added real-time recording feature
  • Added Command Line Interface
  • Added lsl integration
  • Added new packet classes
  • Fixed reconnect issues
  • Removed input requests inside functions

0.1.0 (2019-01-18)

  • First release on PyPI.

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