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A suite of convenience functions for working with OMERO. Written and maintained by the Research IT team at The Jackson Laboratory.

Project description

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ezomero

A module with convenience functions for writing Python code that interacts with OMERO.

Installation

Just pip install ezomero and you should be good to go! The repo contains a requirements.txt file with the specific package versions we test ezomero with, but any Python>=3.6 and latest omero-py and numpy should work - note that this package is in active development!

Usage

In general, you will need to create a BlitzGateway object using omero-py, successfully do something like conn.connect() and then pass the conn object to most of these helper functions along with function-specific parameters.

Documentation

Documentation is available at https://thejacksonlaboratory.github.io/ezomero/

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