Fastachar
Fastachar is a graphical user interface that allows a simple comparison of two sets of DNA sequences. A typical working example is to have a selection of DNA sequences of different, but related species. These sequences are divided in a set A, which are thought to be a single taxon (species) and a set B, which is a collection of different taxa. Using the program, it can be established easily whether:
the DNA sequences in set A are all identical, and if not, list the differences for those positions in the DNA sequences.
set B has positions in the DNA that are different from those in set A, across all species in set B.
Fastachar takes as input the alignments stored in a single file of the fasta format. Fastachar is not a tool to align sequences. It is assumed that the sequences were previously aligned with different algorithms (e.g. MUSCLE) and the most reliable alignment was chosen.
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Release files for fastachar 0.2.4
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| fastachar-0.2.4.tar.gz | 1.8 MB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| fastachar-0.2.4-py3.7.egg | Legacy Egg format | - | - | Details |
Total release size: 1.8 MB
Release files / fastachar-0.2.4.tar.gz
| Download URL | fastachar-0.2.4.tar.gz |
|---|---|
| Size | 1.8 MB |
| Tags | Source |
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twine/1.13.0 pkginfo/1.4.2 requests/2.22.0 setuptools/40.8.0 requests-toolbelt/0.9.1 tqdm/4.45.0 CPython/3.7.7
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Release files / fastachar-0.2.4-py3.7.egg
| Download URL | fastachar-0.2.4-py3.7.egg |
|---|---|
| Size | 55.2 kB |
| Tags | Egg |
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SHA-256 checksum How to use checksums |
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twine/1.13.0 pkginfo/1.4.2 requests/2.22.0 setuptools/40.8.0 requests-toolbelt/0.9.1 tqdm/4.45.0 CPython/3.7.7
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