fastasplit 1.2.8

Split fasta files

fastasplit

Split fasta files

Josh Tompkin, 2023

Installation and usage

install with pip:

    pip3 install fastasplit

Usage:

    fastasplit [-h] [--version] [-d dir] [-p prefix] [-e] [-f] -n int [-s] [-q] [-v] fasta

Specify number of files with -n <int>, numer of sequences per file with -n <int> -s, or put every sequence into its own file with -e. Run with -h to print help.

Examples

Split a fasta file named 'sequences.fa' into 20 fasta files with equal number of sequences in each:

    fastasplit -n 20 sequences.fa

Split a fasta file named 'sequences.fa' into files with 10 sequences each:

    fastasplit -n 10 -s sequences.fa

Split each sequence in 'sequences.fa' into a separate file:

    fastasplit -e sequences.fa

Changelog

[1.0.0] - 2023-06-??

Added

• Ability to split fasta files into n number of files

[1.1.0] - 2023-06-??

Added

• Ability to split fasta files by number of sequences

[1.2.0] - 2023-06-??

Added

• Ability to split each sequence in fasta file to separate file

[1.2.2] - 2023-07-??

Fixed

• Formatting errors

Added

• Checks for large numbers of output files

[1.2.6] - 2023-07-08

Changed

• breaking: Now installs with pip

[1.2.7] - 2023-07-10

Added

• Documentation for pypi

[1.2.8] - 2023-07-10

Changed

• Formatting in source