Assistance scripts for ONT MinKNOW
Project description
fillet
Table of Contents
Introduction
fillet is a simulation manager for Oxford Nanopore Technologies MinKNOW software, making adding simulation devices and playback runs easier
Installation
Installing fillet with PyPI
pip install fillet
Install fillet from GitHub
git clone https://github.com/alexomics/fillet
cd fillet
python setup.py install
Usage
fillet installs with a terminal entry point as fillet
Add a bulk FAST5 file for simulation:
fillet sim -t <MinKNOW_config_filename> -b <bulk_file_to simulate>
Remove a bulk FAST5 file for simulation:
fillet sim -t <MinKNOW_config_filename>
Add a simulation device:
fillet add
Remove a simulation device:
fillet add -r
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