Flywheel Migration Toolkit
Project description
Flywheel Migration Toolkit
flywheel-migration is a library that provides configurable parsing and de-identification of foreign data.
Development
Install the project using poetry and enable pre-commit.
poetry install
pre-commit install
Testing
Tests are handled in pre-commit containers using qa-ci.
pre-commit run -a pytest
To run all pre-commit hooks, run:
pre-commit run -a
This will execute all hooks defined in .pre-commit-config.yaml.
Alternatively, you can run pytests natively by executing the poetry virtual environment,
then calling pytest
with
poetry shell
pytest -vv tests/
To run individual tests natively such as test_jitter_for_dicom
in
test_dicom_file_profile.py
poetry shell
pytest -vv tests/test_dicom_file_profile.py -sk test_jitter_for_dicom
Release
Releases are handled with qa-ci automation. Head to
Build >> Pipelines
page on repository's sidebar, then click on
Run Pipeline.
Select Variable
in Variables dropdown, and entere REASEASE
as variable key.
Set variable value to desired version and click on Run Pipeline
. This will
create a new release MR that can than be reviewed and merged to deploy a new release.
Documentation
Documentation is automatically handled by pre-commit
hook generate_docs
. The
HTML page is built into public
and deployed to GitLab pages. Documentation is
available at Documentation at
https://flywheel-io.gitlab.io/public/migration-toolkit/.
Project details
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- Uploaded using Trusted Publishing? No
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