Skip to main content

Formulas for mixed-effects models in Python

Project description

PyPI version codecov Code style: black

formulae

formulae is a Python library that implements Wilkinson's formulas for mixed-effects models. The main difference with other implementations like Patsy or formulaic is that formulae can work with formulas describing a model with both common and group specific effects (a.k.a. fixed and random effects, respectively).

This package has been written to make it easier to specify models with group effects in Bambi, a package that makes it easy to work with Bayesian GLMMs in Python, but it could be used independently as a backend for another library. The approach in this library is to extend classical statistical formulas in a similar way than in R package lme4.

Installation

formulae requires a working Python interpreter (3.7+) and the libraries numpy, scipy and pandas with versions specified in the requirements.txt file.

Assuming a standard Python environment is installed on your machine (including pip), the latest release of formulae can be installed in one line using pip:

pip install formulae

Alternatively, if you want the development version of the package you can install from GitHub:

pip install git+https://github.com/bambinos/formulae.git

Documentation

The official documentation can be found here

Notes

  • The data argument only accepts objects of class pandas.DataFrame.
  • y ~ . is not implemented and won't be implemented in a first version. However, it is planned to be included in the future.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

formulae-0.3.2.tar.gz (59.7 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

formulae-0.3.2-py3-none-any.whl (44.0 kB view details)

Uploaded Python 3

File details

Details for the file formulae-0.3.2.tar.gz.

File metadata

  • Download URL: formulae-0.3.2.tar.gz
  • Upload date:
  • Size: 59.7 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/4.0.0 CPython/3.7.12

File hashes

Hashes for formulae-0.3.2.tar.gz
Algorithm Hash digest
SHA256 b80c9d2d936a8b8e3894484b7af50e3a39f5efb0c812c58cd8081f17ceb7414b
MD5 239229a39ea320f3442b0b7845c76de6
BLAKE2b-256 095529cde86aad8bd159d3edb4f3040a34d44c9df4164bc5afee6746298c41b5

See more details on using hashes here.

File details

Details for the file formulae-0.3.2-py3-none-any.whl.

File metadata

  • Download URL: formulae-0.3.2-py3-none-any.whl
  • Upload date:
  • Size: 44.0 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/4.0.0 CPython/3.7.12

File hashes

Hashes for formulae-0.3.2-py3-none-any.whl
Algorithm Hash digest
SHA256 624cbee1b00ce7ca5d3e49df26e195607e1321e73ac002a539fa2469e8d3a803
MD5 ad9439395a245a0906913e51937b43d4
BLAKE2b-256 1d7ce4987cfcf4e2472348ca0b78daa79745f0e4f7e91dc713548bf2399c5a33

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page