Read hippocampal subfield volumes computed by Freesurfer and/or ASHS
Project description
Read hippocampal subfield volumes computed by Freesurfer and/or ASHS
https://sites.google.com/site/hipposubfields/home https://surfer.nmr.mgh.harvard.edu/fswiki/HippocampalSubfields
>>> from freesurfer_volume_reader import ashs, freesurfer
>>>
>>> for volume_file in itertools.chain(
>>> ashs.HippocampalSubfieldsVolumeFile.find('/my/ashs/subjects'),
>>> freesurfer.HippocampalSubfieldsVolumeFile.find('/my/freesurfer/subjects')):
>>> print(volume_file.absolute_path)
>>> print(volume_file.subject, volume_file.hemisphere)
>>> print(volume_file.read_volumes_mm3())
>>> print(volume_file.read_volumes_dataframe())
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