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File renamer for FTIR files

Project description

FTIR File Renamer
### Introduction

Renames files from the FTIR based on strict naming scheme

### Installation

From the command line in the folder in which you would like to install the program:

`pip install ftir_renamer`

### Requirements
- Unix-like environment
- Spreadsheet of FTIR-related metadata
- The .FTIR output files corresponding to the FTIR IDs in the spreadsheet

### Required Arguments

The path of the folder containing the FTIR output files
Absolute path to the spreadsheet containing the FTIR metadata
The absolute path of the folder to store the renamed files

### Running

##### Example command to run the script

` -f /path/to/FTIR.xlsx -s /path/to/files -o /path/to/outputs`

##### Usage


Rename files for FTIR experiments using strict naming scheme

-h, --help show this help message and exit
required arguments:
Path of .spc files to process.
-f FILENAME, --filename FILENAME
Name of .xls(x) file with renaming information. Must
conform to agreed upon format (see README for
additional information). This file must be in the
Optionally specify the folder in which the renamed
files are to be stored. Provide thefull path e.g.

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ftir_renamer-0.3.tar.gz (4.1 kB view hashes)

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