Forward-time population genetic simulation in Python
Project description
This is the README for fwdpy11, which is a Python package for forward-time population genetic simulation. It uses fwdpp as its C++ back-end.
Build status
Master:
Development:
Manual
Latest/master:
Development branch:
Features
Picklable population objects
Parallel computation via multiprocessing or concurrent.futures.
Custom temporal samplers to analyze populations during a simulation may be written in pure Python.
Dependencies
The following must be present on your system:
License
GPLv3 or later (See COPYING)
Suppored Python version
fwdpy11 is written for Python 3. Given time/energy, we _may_ look into supporting Python 2.7. However, it is impossible to support all fwdpy11 features in Python 2.7. Specifically, it is not possible to provide full pickling support.
git submodule init
git submodule update
python setup.py build_ext -i
python test.py
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.