g2gtools 0.1.25

A set of tools that facilitates genome to genome conversion for studying multiparent populations

g2gtools creates custom genomes by incorporating (phased) SNPs and indels into reference genome, extracts regions of interest, e.g., exons or transcripts, from custom genomes, and converts coordinates of files (bam, gtf, bed) between two genomes.

• Free software: GNU General Public License v3 (GPLv3)

• Documentation: https://g2gtools.readthedocs.org.

Reference

Manuscript in preparation (expected in 2016).

History

0.1.25 (05/04/2016)

• Uploaded the package to Anaconda.org

0.1.23 (02/15/2016)

• Setup Travis CI for automated building

0.1.22 (02/15/2016)

• Updated documentation

0.1.20 (02/03/2016)

• Released to public with documentation at g2gtools.readthedocs.org

0.1.0 (02/09/2015)

• Started github repository