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vrsatile-pydantic
Translation of the GA4GH VRS v1.2.0 and VRSATILE schemas to a Pydantic data model
Developer instructions
To install vrstaile-pydantic:
pip install ga4gh.vrsatile.pydantic
Following are sections include instructions specifically for developers.
For a development install, we recommend using Pipenv. See the pipenv docs for direction on installing pipenv in your compute environment.
Once installed, from the project root dir, just run:
pipenv lock
pipenv sync
Init coding style tests
Code style is managed by flake8 and checked prior to commit.
We use pre-commit to run conformance tests.
This ensures:
- Check code style
- Check for added large files
- Detect AWS Credentials
- Detect Private Key
Before first commit run:
pre-commit install
Running unit tests
Running unit tests is as easy as pytest.
pipenv run pytest
3 maintainers
Metadata
3 maintainers
Release files for ga4gh.vrsatile.pydantic 0.0.9
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| ga4gh.vrsatile.pydantic-0.0.9.tar.gz | 9.7 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| ga4gh.vrsatile.pydantic-0.0.9-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 19.5 kB
Release files / ga4gh.vrsatile.pydantic-0.0.9.tar.gz
| Download URL | ga4gh.vrsatile.pydantic-0.0.9.tar.gz |
|---|---|
| Size | 9.7 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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twine/3.8.0 pkginfo/1.8.2 readme-renderer/32.0 requests/2.27.1 requests-toolbelt/0.9.1 urllib3/1.26.8 tqdm/4.62.3 importlib-metadata/4.11.1 keyring/23.5.0 rfc3986/2.0.0 colorama/0.4.4 CPython/3.10.2
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Release files / ga4gh.vrsatile.pydantic-0.0.9-py3-none-any.whl
| Download URL | ga4gh.vrsatile.pydantic-0.0.9-py3-none-any.whl |
|---|---|
| Size | 9.8 kB |
| Tags | Python 3 |
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SHA-256 checksum How to use checksums |
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| Uploaded via |
twine/3.8.0 pkginfo/1.8.2 readme-renderer/32.0 requests/2.27.1 requests-toolbelt/0.9.1 urllib3/1.26.8 tqdm/4.62.3 importlib-metadata/4.11.1 keyring/23.5.0 rfc3986/2.0.0 colorama/0.4.4 CPython/3.10.2
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