galaxy-schema 24.1.2

Galaxy auth framework and implementations

Overview

The Galaxy API schema objects.

• Code: https://github.com/galaxyproject/galaxy

History

24.1.2 (2024-09-25)

Bug fixes

• Handle error when workflow is unowned in Invocation view by @ahmedhamidawan in #18730

• Fix datatype validation of newly built collection by @mvdbeek in #18738

• Fix job summary for optional unset job data inputs by @mvdbeek in #18754

• Fix TypeError from Pydantic 2.9.0 by @nsoranzo in #18788

• Fix wrong extension on pick data output by @mvdbeek in #18798

• Make all fields optional for HelpForumPost by @davelopez in #18839

Enhancements

• Include workflow invocation id in exception logs by @mvdbeek in #18594

24.1.1 (2024-07-02)

Enhancements

• Visualizing workflow runs with an invocation graph view by @ahmedhamidawan in #17413

• Add email notifications channel by @davelopez in #17914

• Enable warn_unused_ignores mypy option by @nsoranzo in #17991

• Add pagination support to Files Source plugins by @davelopez in #18059

• Enable flake8-implicit-str-concat ruff rules by @nsoranzo in #18067

• Empower users to bring their own storage and file sources by @jmchilton in #18127

• Display DOIs in Archived Histories by @davelopez in #18134

• Allow running and editing workflows for specific versions by @ahmedhamidawan in #18378

24.0.3 (2024-06-28)

Bug fixes

• do not expand datasets that are known to be inaccessible by @martenson in #17818

• Allow purge query param, deprecate purge body param by @mvdbeek in #18105

• Fix deprecated deprecated argument by @mvdbeek in #18119

• Fix users API serialization when listing users by @davelopez in #18329

• Fix update group API payload model by @davelopez in #18374

• Serialize purged flag for datasets in collections by @davelopez in #18420

24.0.2 (2024-05-07)

No recorded changes since last release

24.0.1 (2024-05-02)

Bug fixes

• Fix tag regex pattern by @jdavcs in #18025

• Fix History Dataset Association creation so that hid is always set by @mvdbeek in #18036

24.0.0 (2024-04-02)

Bug fixes

• Fix Workflow Comment Model for Pydantic 2 by @ElectronicBlueberry in #17296

• Add basic model import attribute validation by @mvdbeek in #17628

• Make latest_workflow_uuid optional by @mvdbeek in #17629

• Fix workflow person validation by @dannon in #17636

• Make WorkflowInput label, value and uuid optional by @mvdbeek in #17638

• Fix step type serialization for StoredWorkflowDetailed models by @mvdbeek in #17716

• Fix input parameter step type by @mvdbeek in #17767

• Fix optional types in Help Forum API by @davelopez in #17832

• Fix archived histories mixing with active in histories list by @davelopez in #17856

Enhancements

• port invocation API to fastapi by @martenson in #16707

• Python 3.8 as minimum by @mr-c in #16954

• Toward declarative help for Galaxy markdown directives. by @jmchilton in #16979

• Create pydantic model for the return of show operation - get: /api/jobs/{job_id} by @heisner-tillman in #17153

• Vueifiy History Grids by @guerler in #17219

• Refactor two of the missing invocation routes to FastAPI by @heisner-tillman in #17237

• Migrate models to pydantic 2 by @mvdbeek in #17262

• Combines legacy qv-pattern and advanced filter pattern in history index endpoint by @guerler in #17368

• Update to black 2024 stable style by @nsoranzo in #17391

• Allow using tool data bundles as inputs to reference data select parameters by @mvdbeek in #17435

• Refactor Workflow API routes - Part 1 by @heisner-tillman in #17463

• Consolidate resource grids into tab views by @guerler in #17487

• Display workflow invocation counts. by @jmchilton in #17488

• Filter out subworkflow invocations by @mvdbeek in #17558

• Restore histories API behavior for keys query parameter by @davelopez in #17779

• Fix datasets API custom keys encoding by @davelopez in #17793

23.2.1 (2024-02-21)

First release