gaste-test 0.0.6

Gamma approximation of stratified truncated exact test

Gaste Package

Welcome to the Gaste package! This package provides a set of tools and utilities for analyzing stratified 2x2 contingency table. Gives the exact or approximate p-value of the overall association between features and outcomes under 2x2 stratified contingency table.

Installation

To install the Gaste package, simply run the following command:

pip install gaste-test

Usage

Once installed, you can import the Gaste package or the main function in your Python code using the following line:

import gaste-test
from gaste-test import get_pval_comb, StratifiedTable2x2

Features

The Gaste package offers the following features:

• Exact calcul of p-value combination of one tail Fisher's exact test
• Approximation of the law of combination by Gamma approximation distribution
• Incorporating truncation into the p-value combination enhances statistical power in scenarios featuring few effects or contradictory effects between strata
• Visualization: Forest plot for data analysis.

Documentation

For detailed information on how to use the Gaste package, please refer to the sphinx documentation

Contributing

We welcome contributions from the community! If you would like to contribute to the Gaste package, feel free to contact the autor by mail.

License

The Gaste package is licensed under the MIT License.