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GCGC is a preprocessing library for biological sequence model development.

Project description

GCGC

GCGC is a tool for feature processing on Biological Sequences.

DOI code style black

Installation

GCGC is primarily intended to be used as part of a larger workflow inside Python, but it can also be used as a docker container.

To install via pip:

$ pip install gcgc

And to pull the docker image:

$ docker pull docker.io/thauck/gcgc

Documentation

The GCGC documentation is at gcgc.trenthauck.com, please see it for an example.

Citing GCGC

If you use GCGC in your research, cite it with the following:

@misc{trent_hauck_2018_2329966,
  author       = {Trent Hauck},
  title        = {GCGC},
  month        = dec,
  year         = 2018,
  doi          = {10.5281/zenodo.2329966},
  url          = {https://doi.org/10.5281/zenodo.2329966}
}

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