generations 1.0.0

A set of recursive population models for ecologists

generations

A set of recursive population models for ecologists including:

• Nicholson Bailey host-parasitoid model
• Weed-herbivore coupled model for an annual seedbanking plant from Buckley et al. 2005
• Weed-herbivore model for a biennial seedbanking plant

Running

python -m generations.nicholson_bailey
python -m generations.buckley
python -m generations.biennial

Testing

./test.sh

This will run the unit tests. If you have pipenv, it will also run a number of other checks:

• yapf: reformat the code automatically
• mypy: check for runtime errors like misnamed imports or variables, or incompatible types
• tox: run the unit tests against Python 2.7 and 3.7
• coverage: report on lines that are not covered by unit tests

Uploading to PyPI

Install pipenv if you don't have it.

Run the tests one last time:

./test.sh

Build the distribution files:

pipenv run python3 setup.py sdist bdist_wheel

Upload using twine. It will prompt for your PyPI password:

pipenv run twine upload dist/*