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Datastructures for manipulating, querying and plotting genomic data.

Project description


GenoPandas is a library that provides various datastructures to support manipulation, querying and plotting of genomic data in Python. To do so, GenoPandas provides several pandas-based data structures, such as the GenomicDataFrame and AnnotatedMatrix classes, which can be used to store different types of genomic data. For basic analyses, these classes also provide a variety of different manipulation and plotting functions.


PyIM’s documentation is available at


Coming soon!


This software is released under the MIT license.



  • Initial release with GenomicsDataFrame + AnnotatedMatrix classes.

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