Downloads data and metadata from GEO and SRA and creates standard PEPs.
Project description
geofetch is a command-line tool that downloads sequencing data and metadata from GEO and SRA and creates standard PEPs. Documentation is hosted at code.databio.org/geofetch (source in the /docs folder).
You can convert the result of geofetch into bam files with the sra_convert pipeline.
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| Filename, size | File type | Python version | Upload date | Hashes |
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| Filename, size geofetch-0.3.tar.gz (18.3 kB) | File type Source | Python version None | Upload date | Hashes View |