geometricus 0.1.1

Fast, structure-based, alignment-free protein embedding

<p align=”center”><img src=”geometricus_logo.png” width=”300” title=”Geometricus Logo”></p>

# Geometricus Represents Protein Structures as Shape-mers derived from Moment Invariants

A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.

See the [documentation](https://turtletools.github.io/geometricus/)

TODO: Add link to paper

## Installation Geometricus is a Python (3.7+) package with NumPy, SciPy, Numba and ProDy as dependencies.

Install with pip install geometricus

## Usage See the [Getting Started](https://turtletools.github.io/geometricus/getting_started) page for example usage.