Render GPML pathway markup to SVG from the commandline/Python.
Project description
GPML2SVG is a command line and Python API for the conversion of pathways marked up using GPML (GenMAPP Pathway Markup Language) to SVG. The command-line interface is currently basic. Simply call the script with the name of the GPML file to convert. The resulting SVG will be saved using the same name, with the extension change to .svg. The resulting SVG is marked up with object identifiers, and links to relevant databases. The python interface offers a single function call to which you can optionally provide colouring information (for data visualisation) and links for custom XRefs. The sofware is in development as an extension to MetaPath.
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
File details
Details for the file gpml2svg-0.3.0.tar.gz.
File metadata
- Download URL: gpml2svg-0.3.0.tar.gz
- Upload date:
- Size: 11.1 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | 0d4583506afcb5f80247feeddb094f89b4778cf73f53b8ab95b44593d51532d6 |
|
| MD5 | fa772eae47d706177b8a36e775a81003 |
|
| BLAKE2b-256 | be79d6e895dde69e224cc3a8f961fd6402c32c50fd59a60cb721b57b041fdff6 |
