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GraphKB (Python)

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This repository is part of the platform for oncogenomic reporting and interpretation.

Python adapter package for querying the GraphKB API. See the user manual

Getting Started

Install (For developers)

clone this repository

git clone https://github.com/bcgsc/pori_graphkb_python
cd pori_graphkb_python

create a virtual environment

python3 -m venv venv
source venv/bin/activate

install the package and its development dependencies

pip install -U pip setuptools
pip install -e .[dev]

Run Tests

pytest tests

Generating the Documentation

User documentation for this repository is hosted in the central PORI repository

Deployment (Publishing)

Install the deployment dependencies

pip install .[deploy]

Build the distribution files

python setup.py install sdist bdist_wheel

Upload the distibutions to the package server (-r is defined in your pypirc)

twine upload -r bcgsc dist/*

Metadata

Release files for graphkb 1.15.0

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution (sdist)

Source distribution for graphkb 1.15.0
File Size Uploaded
graphkb-1.15.0.tar.gz 43.4 kB Details

Built distribution (wheel)

Table of built distributions (wheels) for graphkb 1.15.0
File Interpreter ABI Platform
graphkb-1.15.0-py3-none-any.whl Python 3 none any Details

Total release size: 91.3 kB

Release files / graphkb-1.15.0.tar.gz

Download URL graphkb-1.15.0.tar.gz
Size 43.4 kB
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dd52bf35bf8c6dda95e451e9512bfd231ed4777560a69de499c330736cc6060f
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What is trusted publishing?
No
Uploaded via twine/4.0.2 CPython/3.12.0

Release files / graphkb-1.15.0-py3-none-any.whl

Download URL graphkb-1.15.0-py3-none-any.whl
Size 47.8 kB
Tags Python 3
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How to use checksums
d20f5fd345bc4b12c8a66a15f41dd270e0f0375435cf5401bb674a6376ef93ad
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Uploaded using Trusted Publishing?
What is trusted publishing?
No
Uploaded via twine/4.0.2 CPython/3.12.0

Release history Release notifications | RSS feed

This release

1.15.0 This release

2 release files

1.14.0

2 release files

1.12.0

2 release files

1.11.0

2 release files

1.10.2

2 release files

1.9.0

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1.8.0

2 release files

1.7.0

2 release files

1.6.0

2 release files

1.5.4

2 release files

1.5.3

2 release files

1.5.2

2 release files

1.5.1

2 release files

1.5.0

2 release files

1.4.0

2 release files

1.3.7

2 release files

1.3.6

2 release files

1.3.5

2 release files

1.3.4

2 release files

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