GraphKB (Python)
This repository is part of the platform for oncogenomic reporting and interpretation.
Python adapter package for querying the GraphKB API. See the user manual
Getting Started
Install (For developers)
clone this repository
git clone https://github.com/bcgsc/pori_graphkb_python
cd pori_graphkb_python
create a virtual environment
python3 -m venv venv
source venv/bin/activate
install the package and its development dependencies
pip install -U pip setuptools
pip install -e .[dev]
Run Tests
pytest tests
Generating the Documentation
User documentation for this repository is hosted in the central PORI repository
Deployment (Publishing)
Install the deployment dependencies
pip install .[deploy]
Build the distribution files
python setup.py install sdist bdist_wheel
Upload the distibutions to the package server (-r is defined in your pypirc)
twine upload -r bcgsc dist/*
Metadata
Release files for graphkb 1.15.0
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| graphkb-1.15.0.tar.gz | 43.4 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| graphkb-1.15.0-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 91.3 kB
Release files / graphkb-1.15.0.tar.gz
| Download URL | graphkb-1.15.0.tar.gz |
|---|---|
| Size | 43.4 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/4.0.2 CPython/3.12.0
|
Release files / graphkb-1.15.0-py3-none-any.whl
| Download URL | graphkb-1.15.0-py3-none-any.whl |
|---|---|
| Size | 47.8 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
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|
BLAKE2b-256 checksum How to use checksums |
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|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/4.0.2 CPython/3.12.0
|