Creates iTOL files for tree decoration, given a set of GTDB genomes.
Project description
gtdb-itol-decorate
Creates iTOL files for tree decoration, given a set of GTDB genomes.
Installation
pip install gtdb-itol-decorate
Usage
Note: The taxonomy file is available from the GTDB data repository.
gtdb_itol_decorate /path/to/tree.tree /path/to/taxonomy.tsv /path/to/output
Project details
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
gtdb_itol_decorate-1.1.0.tar.gz
(19.9 kB
view details)
Built Distribution
File details
Details for the file gtdb_itol_decorate-1.1.0.tar.gz
.
File metadata
- Download URL: gtdb_itol_decorate-1.1.0.tar.gz
- Upload date:
- Size: 19.9 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/4.0.1 CPython/3.8.14
File hashes
Algorithm | Hash digest | |
---|---|---|
SHA256 | faeb252c5bab9cc54315906f0536da3614790b182fec63546e6357efcbf83515 |
|
MD5 | a50c6619c697af4fa46d47d3236a5680 |
|
BLAKE2b-256 | a2627d6219ac026603ab629a9885d3a6fa8dbc8c158904af9c6a3e0a1a9bfe56 |
File details
Details for the file gtdb_itol_decorate-1.1.0-py3-none-any.whl
.
File metadata
- Download URL: gtdb_itol_decorate-1.1.0-py3-none-any.whl
- Upload date:
- Size: 21.6 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/4.0.1 CPython/3.8.14
File hashes
Algorithm | Hash digest | |
---|---|---|
SHA256 | d631ff7c65a399c9569fcdb07f43f8fc07e5b309c44219af8e8445b54581775f |
|
MD5 | 33c897599cc4f6e0cf19fe9a1fe04ce6 |
|
BLAKE2b-256 | 180cdd228470f4bc090d957ba323e926f14d969882a6644df909c5ba3f92ce43 |