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Extract datasets from a h5 file, depending on referenced dataset from a xml file.

Project description

hdf5-extractor

Extract mini hdf5 files from an epc and an H5 file. The mini-h5 are created by finding Datasets referenced from the epc. Each representation will have its own mini-h5 file.

installation :

With poetry :

poetry add hdf5extractor

With pip :

pip install hdf5extractor

Run :

Extract a small h5 from a bigger one, to only have dataset of a specific resqml file :

extracth5 -i myResqmlFile.xml --h5 myH5File.h5 -o outputFolder

Extract every h5 parts from a bigger one, to only have in each, the dataset of a specific resqml file inside an epc :

extracth5 -i myEPCFile.epc --h5 myH5File.h5 -o outputFolder

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