Download and parse curated HDX-MS datasets
Project description
HDXMS Datasets
- Free software: MIT license
Example code
from hdxms_datasets import DataVault
vault = DataVault()
# Download a specific HDX dataset
vault.fetch_dataset("20221007_1530_SecA_Krishnamurthy")
# Load the dataset
ds = vault.load_dataset("20221007_1530_SecA_Krishnamurthy")
# Load the FD control of the first 'state' in the dataset.
fd_control = ds.parser.load_peptides(0, 'FD_control')
# Load the corresponding experimental peptides.
peptides = ds.parser.load_peptides(0, 'experiment')
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
hdxms-datasets-0.0.0.tar.gz
(16.5 kB
view hashes)
Built Distribution
Close
Hashes for hdxms_datasets-0.0.0-py3-none-any.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 2aa6f13d249dabe5349aef3b1529d02a34a6e331520431e7e31206b7732a4459 |
|
MD5 | 504633a4dd0008f134447fc2b307fcf1 |
|
BLAKE2b-256 | f59ccff68532b452ac813c40aa75e2f498299b4908067adf9535c24631764778 |