Download and parse curated HDX-MS datasets
Project description
HDXMS Datasets
- Free software: MIT license
Example code
from hdxms_datasets import DataVault
vault = DataVault()
# Download a specific HDX dataset
vault.fetch_dataset("20221007_1530_SecA_Krishnamurthy")
# Load the dataset
ds = vault.load_dataset("20221007_1530_SecA_Krishnamurthy")
# Load the FD control of the first 'state' in the dataset.
fd_control = ds.parser.load_peptides(0, 'FD_control')
# Load the corresponding experimental peptides.
peptides = ds.parser.load_peptides(0, 'experiment')
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