Assembling and modeling the knowledge around heme pathogenicity and pathway dysregulation in the context of hemolytic disorders. The data hosted in this repo was curated by Farah Humayun in context of her Master’s Thesis. The curated documents are located in the hemekg directory.
Citation
If you find HemeKG useful in your work, please consider citing:
Installation
To install the hemekg python package for programmatic access to the BEL files in this repository, use the following code in your shell:
$ git clone https://github.com/hemekg/hemekg.git
$ cd hemekg
$ pip install -e .Commands
To see all the commands, simply run:
$ hemekgUsage
To get the BEL graph, use the following code:
>>> import hemekg
>>> graph = hemekg.get_graph()
>>> graph.summarize()Annotations
Auxiliary annotations are located in the hemekg/annotations directory. These include:
TimePoint.
Species.
Concentration.
1 maintainer
Metadata
1 maintainer
Release files for hemekg 0.0.1
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
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| hemekg-0.0.1.tar.gz | 2.7 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| hemekg-0.0.1-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 8.7 kB
Release files / hemekg-0.0.1.tar.gz
| Download URL | hemekg-0.0.1.tar.gz |
|---|---|
| Size | 2.7 kB |
| Tags | Source |
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Release files / hemekg-0.0.1-py3-none-any.whl
| Download URL | hemekg-0.0.1-py3-none-any.whl |
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| Size | 6.0 kB |
| Tags | Python 3 |
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