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Common Python code used in HGI projects.

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Common Python used in HGI projects

How to use


  • Python >= 3.5


Stable releases can be installed via PyPI:

$ pip3 install hgicommon

Bleeding edge versions can be installed directly from GitHub:

$ pip3 install git+<commit_id_or_branch_or_tag>#egg=hgicommon

To declare this library as a dependency of your project, add it to your requirement.txt file.



Install both library dependencies and the dependencies needed for testing:

$ pip3 install -q -r requirements.txt
$ pip3 install -q -r test_requirements.txt


Using nosetests, in the project directory, run:

$ nosetests -v

To generate a test coverage report with nosetests:

$ nosetests -v --with-coverage --cover-package=hgicommon --cover-inclusive nosetests -v --with-coverage --cover-package=hgicommon --cover-inclusive --exclude-test-file=excluded_tests.txt



Copyright (c) 2015, 2016 Genome Research Limited

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