Converter between .hic files (from juicer) and single-resolution or multi-resolution .cool files (for cooler). Both hic and cool files describe Hi-C contact matrices. Intended to be lightweight, this can be used as a simple imported package or a stand-alone Python file for command line conversion.

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  • License: MIT License (MIT)
  • Author: Carl Vitzthum
  • Tags bioinformatics, genomics, hi-c, juicer, cooler, contact-matrix, file-format
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Avatar for aveit from gravatar.com aveit Avatar for clarabakker from gravatar.com clarabakker Avatar for hms_pypi from gravatar.com hms_pypi Avatar for soolee from gravatar.com soolee

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  • License: MIT License (MIT)
  • Author: Carl Vitzthum
  • Tags bioinformatics, genomics, hi-c, juicer, cooler, contact-matrix, file-format
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1.0.1

1.0.0

0.8.3

0.8.2

0.8.1

0.8.0

0.7.3

0.7.2

0.7.1

0.7.0

0.6.5

0.6.4

0.6.3

0.6.2

0.6.1

0.6.0

0.5.1

This version

0.5.0

0.4.2

0.4.1

0.4.0

0.3.7

0.3.6

0.3.5

0.3.4

0.3.3

0.3.0

0.2.0

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hic2cool-0.5.0-py3.6.egg (31.6 kB view hashes)

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hic2cool-0.5.0-py3-none-any.whl (17.3 kB view hashes)

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