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Python bindings for the HiGlass viewer

Project description

# higlass-python #

Python bindings to the HiGlass viewer.

### For development ###

  • Install the package in _editable_ mode. (The module will be imported from the development directory, rather than copied to site-packages).

`bash $ pip install -e . `

  • Build and enable the Jupyter Notebook Extension. (With the –symlink option, the assets in higlass/static are linked to the extension registry rather than copied.)

`bash $ python setup.py jsdeps $ jupyter nbextension enable --py --sys-prefix widgetsnbextension $ jupyter nbextension install --py --symlink --sys-prefix higlass $ jupyter nbextension enable --py --sys-prefix higlass `

  • Uninstall the Jupyter Notebook Extension

`bash $ jupyter nbextension uninstall --py --sys-prefix higlass `

  • Experimental: install the Jupyter Lab Extension

`bash $ cd js && jupyter labextension link . `

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higlass-python-0.1.0.tar.gz (3.2 MB view hashes)

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