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Higher-Order Co-occurrence

Project description

License PyPI version

HiOrCo

Computing Higher-Order Co-occurrence patterns in microbial samples.

Installation

Can be easily installed using pip:

pip install hiorco

Usage

As simple as:

hiorco samples.tsv

You can download our example here: samples.tsv, and check the documentation for more options and details:

hiorco -h

Credits

Daniel Machado, European Molecular Biology Laboratory (EMBL), 2019

Project details


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