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Python package to analyze compliance with fair-software.eu recommendations

Project description

Python package to analyze a GitHub repository’s compliance with the fair-software.eu recommendations.

https://zenodo.org/badge/DOI/10.5281/zenodo.4017908.svg https://img.shields.io/pypi/v/howfairis.svg?colorB=blue https://github.com/fair-software/howfairis/workflows/Build/badge.svg https://img.shields.io/badge/fair--software.eu-%E2%97%8F%20%20%E2%97%8F%20%20%E2%97%8F%20%20%E2%97%8F%20%20%E2%97%8B-yellow

Install

pip3 install --user howfairis

Afterwards check that the install directory was added to the PATH environment variable. You should then be able to call the executable, like so:

howfairis https://github.com/owner/repo      # Linux | Mac
howfairis.exe https://github.com/owner/repo  # Windows

Expected output

Depending on for which repository you are doing the analysis, the output looks something like this:

Checking compliance with fair-software.eu...
Running for https://github.com/fair-software/badge-test
(1/5) repository
       has_open_repository
(2/5) license
       has_license
(3/5) registry
      × has_bintray_badge
      × has_conda_badge
      × has_cran_badge
      × has_crates_badge
      × has_maven_badge
      × has_npm_badge
       has_pypi_badge
      × has_rsd_badge
      × is_on_github_marketplace
(4/5) citation
      × has_citation_file
      × has_citationcff_file
      × has_codemeta_file
       has_zenodo_badge
      × has_zenodo_metadata_file
(5/5) checklist
       has_core_infrastructures_badge
      × has_sonarcloud_badge

Calculated compliance:     

Expected badge is equal to the actual badge. It's all good.

Development install

# Create a virtualenv, e.g. with
python3 -m virtualenv -p python3 venv3

# activate virtualenv
source venv3/bin/activate

# (from the project root directory)
# install howfairis as an editable package
pip install --editable .
pip install --editable .[dev]

Afterwards check that the install directory was added to the PATH environment variable. You should then be able to call the executable, like so:

howfairis https://github.com/owner/repo      # Linux | Mac
howfairis.exe https://github.com/owner/repo  # Windows

For maintainers

Bumping the version across all files is done with bump2version, e.g.

bump2version minor

Making a release

Make sure the version is correct.

# In a new terminal, without venv
cd $(mktemp -d --tmpdir howfairis.XXXXXX)
git clone https://github.com/fair-software/howfairis.git .
python3 -m virtualenv -p python3 venv3
source venv3/bin/activate
pip install --no-cache-dir --editable .
pip install --no-cache-dir --editable .[publishing]
rm -rf howfairis.egg-info
rm -rf dist
python setup.py sdist

# upload to test pypi instance
twine upload --repository-url https://test.pypi.org/legacy/ dist/*

# In a new terminal, without venv

# check you don't have an existing howfairis
python3 -m pip uninstall howfairis

# install in user space from test pypi instance:
python3 -m pip -v install --user --no-cache-dir \
--index-url https://test.pypi.org/simple/ \
--extra-index-url https://pypi.org/simple howfairis

# check that the package works as it should when installed from pypitest

# Back to the first terminal,
# FINAL STEP: upload to PyPI
twine upload dist/*

Don’t forget to also make a release on GitHub.

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