Hyperspectral data analysis and machine learning
Project description
hypers
hypers provides a data structure in python for hyperspectral data. The data structure includes:
- Tools for processing and exploratory analysis of hyperspectral data
- Interactive hyperspectral viewer (using PyQt) that can be accessed as a method from the object
- Allows for unsupervised machine learning directly on the object
The data structure is built on top of the numpy ndarray
, and this package simply adds additional functionality that
allows for quick analysis of hyperspectral data. Importantly, this means that the object can still be used as a
normal numpy array.
Please note that this package is currently in pre-release. It can still be used, however there is likely to be significant changes to the API. The first public release will be v0.1.0.
Contents
Installation
To install using pip
:
pip install hypers
The following packages will also be installed:
- numpy
- scipy
- PyQt5
- pyqtgraph
Features
Features implemented in hypers
include:
- Hyperspectral viewer
- Vertex component analysis
- Abundance mapping
A full list of features can be found here.
Examples
Interactive viewer
The interactive viewer can be particularly helpful for exploring a completely new dataset for the first time to get a feel for the type of data you are working with. An example from a coherent anti-Stokes Raman (CARS) dataset is shown below:
Documentation
The docs are hosted here.
License
hypers is licensed under the OSI approved BSD 3-Clause License.
References
- VCA algorithm
J. M. P. Nascimento and J. M. B. Dias, "Vertex component analysis: a fast algorithm to unmix hyperspectral data," in IEEE Transactions on Geoscience and Remote Sensing, 2005
Adapted from repo.
Project details
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.