Project description
ic_slide is a sdk wrapper for coriander project of intemedic.it providers slide apis for python projects of internal company. It can not used for public domains.
Installing
Install and update using pip:
pip install -U ic_slide
A Simple Example
sample of open-slide.
from ic_slide import open_slide
# open a slide with slide id.
slide_id = '4395d816-2832-e7b7-6472-39f9b9f93480'
open_slide(slide_id)
# get metadata of slide.
metadata = slide.metadata
# get tile image (PIL.Image) of slide with x=0, y=0, width=512, height=512
tile = slide.read_region(0,0,512,512)
sample of enumerate tiles to a slide.
from ic_slide import enumerate_tiles
import numpy as np
# enumerate tiles from begin to stop with specified stride and size.
slide_id = '4395d816-2832-e7b7-6472-39f9b9f93480'
iterated_tiles = enumerate_tiles(slide_id, [0,0], [8192,8192], 400, [512,512])
for tile in iterated_tiles:
do_something(tile)
sample of enumerate slide entries of private cloud.
from ic_slide import get_slide_entries
#get all slide entries
slide_entries = get_slide_entries()
for entry in slide_entries:
print(entry.Name)
sample of get distinct slide id of private cloud.
from ic_slide import get_distinct_slide_ids
slide_ids = get_distinct_slide_ids()
for slide_id in slide_ids():
do_something(slide_id)
sample of get annotations of slide entry.
from ic_slide import get_slide_entries, get_slide_entry_annotations
#get all slide entries
slide_entries = get_slide_entries()
for entry in slide_entries:
entry_id = entry.Id
annotations = get_slide_entry_annotations(entry_id)
1 maintainer
Metadata
1 maintainer
Release files for ic-slide 0.0.9
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| ic_slide-0.0.9.tar.gz | 8.3 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| ic_slide-0.0.9-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 18.3 kB
Release files / ic_slide-0.0.9.tar.gz
| Download URL | ic_slide-0.0.9.tar.gz |
|---|---|
| Size | 8.3 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/3.2.0 pkginfo/1.5.0.1 requests/2.24.0 setuptools/49.3.0 requests-toolbelt/0.9.1 tqdm/4.48.2 CPython/3.7.6
|
Release files / ic_slide-0.0.9-py3-none-any.whl
| Download URL | ic_slide-0.0.9-py3-none-any.whl |
|---|---|
| Size | 9.9 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
a8403987d9c0807eefb292fa94513c7c12e022fed68f653e4d6eacfa8d2fb280
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BLAKE2b-256 checksum How to use checksums |
0fb3e390cede9003d9d8256f2d9582f572e013aadd792436b3127182b8aabcfe
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| Upload date | |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/3.2.0 pkginfo/1.5.0.1 requests/2.24.0 setuptools/49.3.0 requests-toolbelt/0.9.1 tqdm/4.48.2 CPython/3.7.6
|
