Integrated Differential Expression and Annotation

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License: MIT License (MIT)

Author: Noam Teyssier

Tags bioinformatics, differential expression, annotation, networks

Requires: Python >=3.8, <4.0

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IDEA

Integrated Differential Expression and Annotation

This is a python module to perform GO analysis using Enrichr and visualize the bipartite graph of terms and genes as an interactive force-directed graph.

This uses pvsvg as the python wrapper to the force-directed graph visualization javascript library vis.js and ggetrs to perform the gene set enrichment using the Enrichr API.

Installation and Usage

Checkout my documentation for information on installation, usage, and recipes for analysis.

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Meta

License: MIT License (MIT)

Author: Noam Teyssier

Tags bioinformatics, differential expression, annotation, networks

Requires: Python >=3.8, <4.0

Classifiers

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