Package for handling IHM mmCIF and BinaryCIF files
Installation with conda, Homebrew or pip
If you are using Anaconda Python, install with
conda install -c conda-forge ihm
On a Mac with Homebrew, install with
brew tap salilab/salilab; brew install ihm
Alternatively, install with pip:
pip install ihm
(Note that pip builds a C extension module for faster parsing of mmCIF files.
This requires that your system has a C compiler. If you don't want to build
the C extension module, install with
pip install ihm --install-option="--without-ext".)
Installation from source code
To build and install from a clone of the GitHub repository, run
python setup.py build python setup.py install
Note that a C extension module is built for faster parsing of mmCIF files.
This requires that your system has a C compiler
and SWIG. If either of these components are missing, you
can choose to build without the extension by adding
--without-ext to both
setup.py command lines above.
There are a number of testcases in the
test directory. Each one can be run
like a normal Python script to test the library. They can also be all run at
once using nose
or pytest. They will also test
the C extension module if it is first built with
python setup.py build_ext --inplace.
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