A pipeline for integrative analysis for scTCR- and scRNA-seq data
Project description
Integrative analysis for single-cell RNA sequencing and single-cell TCR sequencing data
immunopipe is a pipeline based on pipen framework. It includes a set of processes for scTCR- and scRNA-seq data analysis in R, python and bash. The pipeline is designed to be flexible and configurable.
Documentaion
https://pwwang.github.io/immunopipe
Proposing more analyses
If you have any suggestions for more analyses, please feel free to open an issue here
Example
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
immunopipe-0.11.1.tar.gz
(28.9 kB
view details)
Built Distribution
File details
Details for the file immunopipe-0.11.1.tar.gz.
File metadata
- Download URL: immunopipe-0.11.1.tar.gz
- Upload date:
- Size: 28.9 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: poetry/1.7.1 CPython/3.9.18 Linux/6.2.0-1018-azure
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | 2bdf7646956202ebad33deeb76808a378386edd740ebc20509cc2d5c7cb450f5 |
|
| MD5 | 84aef6e3a09745becaafe15916ed3216 |
|
| BLAKE2b-256 | 9aa33b3d7729eedcba2f87b045e6c14c8c842df6b6699166e2a6b9eb951bfee9 |
Provenance
File details
Details for the file immunopipe-0.11.1-py3-none-any.whl.
File metadata
- Download URL: immunopipe-0.11.1-py3-none-any.whl
- Upload date:
- Size: 31.9 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: poetry/1.7.1 CPython/3.9.18 Linux/6.2.0-1018-azure
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | 4a10b77e14f522d07613619d4fd57d6047c69f713684185b4ddda2d6aad0e284 |
|
| MD5 | 8c4341bf1eb0890f2a2b5f4fe7cb2bf0 |
|
| BLAKE2b-256 | 8af3bbdb0dd7a6dfef8bc55c4cf40ecefaee4d46117766b5c16db4b66c6cc841 |
