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Impetuous Quantification, Enrichment and Group Variation Analysis

Project description

Simple Group Analysis

Decomposes a set of expressions into a group expression. The toolkit currently offers enrichment analysis, hierarchical enrichment analysis, PLS regression and rudimentary factor analysis. The expression regulation can be studied via a statistical test that relates it to the observables in the journal file. The final p values are then FDR corrected and the resulting adjusted p values are produced.

The journal and analyte expression file must be ordered the same way with respect to the samples that are positioned on the columns.

Visit the active code via : https://github.com/richardtjornhammar/impetuous

Visit the published code : https://doi.org/10.5281/zenodo.2594690

Cite using : DOI: 10.5281/zenodo.2594690

Install with : pip install impetuous-gfa

Project details


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