Inscopix CNMF-E for automated source extraction

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  • License: GNU Affero General Public License v3 (GNU AFFERO GENERAL PUBLIC LICENSE)
  • Author: Inscopix, Inc.
  • Requires: Python >=3.6
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Inscopix CNMF-E is a constrained non-negative matrix factorization (CNMF) algorithm used to perform automated source extraction from microendoscopic calcium imaging movies. Specifically, it aims to retrieve the spatial location and temporal dynamics of neurons in a fluorescent 1-photon calcium imaging movie. The source code is open and available to developers who wish to further evaluate, modify, and improve the algorithm.

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  • License: GNU Affero General Public License v3 (GNU AFFERO GENERAL PUBLIC LICENSE)
  • Author: Inscopix, Inc.
  • Requires: Python >=3.6
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1.0.2

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