Python implementation of the InSilicoVA Algorithm.
Project description
pyinsilicova
Python implementation of the InSilicoVA algorithm for assigning causes of death to verbal autopsy (VA) data collected with the 2016 WHO VA instrument.
Example run:
from insilicova.api import InSilicoVA
from insilicova.utils import get_vadata
va_data = get_vadata("randomva5")
out = InSilicoVA(data=va_data)
print(out)
results = out.get_results()
results.get_summary() # prints CSMF
results.get_csmf() # returns CSMF
Build Dependencies
This package depends on the C++ library boost (v1.82.0) https://www.boost.org/ and the Python package pyind11 (pybind11 docs).
-
On Windows it is assumed that boost is installed at:
C:\Program Files\boost\boost_1_82_0
(as specified insetup.py
) -
Build the package with
python -m build
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