intake-stac 0.2.0

An intake adapter for building intake catalogs begining with SpatioTemporal Asset Catalogs (STAC)

Intake-stac

This is an intake data source for SpatioTemporal Asset Catalogs (STAC). The STAC specification provides a common metadata specification, API, and catalog format to describe geospatial assets, so they can more easily indexed and discovered. A 'spatiotemporal asset' is any file that represents information about the earth captured in a certain space and time.

Two examples of STAC catalogs are:

• https://planet.stac.cloud/?t=catalogs
• https://landsat-stac.s3.amazonaws.com/catalog.json

Radiant Earth keeps track of a more complete listing of STAC implementations here.

This project provides an opinionated way for users to load datasets from these catalogs into the scientific Python ecosystem. Currently it uses the intake-xarray plugin and supports several file formats including GeoTIFF, netCDF, GRIB, and OpenDAP.

Installation

intake-stac has a few requirements, such as the Intake library. Intake-stac can be installed from Pip or the source repository.

$ pip install intake-stac

From source repository:

$ git clone https://github.com/pangeo-data/intake-stac.git
$ cd intake-stac
$ pip install .

or

$ pip install git+https://github.com/pangeo-data/intake-stac

The examples/ directory contains some example Jupyter Notebooks that can be used to test the functionality.

Versions

To install a specific versions of intake-stac, specify the version in the install command

pip install intake-stac==0.1.0

The table below shows the corresponding versions between intake-stac and STAC:

sat-stac	STAC
0.1.x	0.6.x

Usage

The package can be imported using

from intake_stac import StacCatalog, StacCollection, StacItem

Loading a catalog

You can load data from a STAC catalog by providing the URL to valid STAC catalog entry:

catalog = StacCatalog('https://storage.googleapis.com/pdd-stac/disasters/catalog.json', 'planet-disaster-data')
list(catalog)

You can also point to STAC Collections or Items. Each constructor returns a Intake Catalog with the top level corresponding to the STAC object used for initialization.

stac_cat = StacCatalog('https://landsat-stac.s3.amazonaws.com/catalog.json', 'landsat-stac')
collection_cat = StacCollection('https://landsat-stac.s3.amazonaws.com/landsat-8-l1/catalog.json', 'landsat-8')
items_cat = StacItem('https://landsat-stac.s3.amazonaws.com/landsat-8-l1/111/111/2018-11-30/LC81111112018334LGN00.json', 'LC81111112018334LGN00')

Intake-Stac uses sat-stac to parse STAC objects. You can also pass satstac objects (e.g. satstac.Collection) directly to the Intake-Stac constructors:

import satstac
col = satstac.Collection.open('https://landsat-stac.s3.amazonaws.com/landsat-8-l1/catalog.json')
collection_cat = StacCollection(col, 'landsat-8')

Using the catalog

Once you have a catalog, you can display its entries by iterating through its contents:

for entry_id, entry in catalog.items():
    display(entry)

If the catalog has too many entries to comfortably print all at once, you can narrow it by searching for a term (e.g. 'thumbnail'):

for entry_id, entry in catalog.search('thumbnail').items():
  display(entry)

Loading a dataset

Once you have identified a dataset, you can load it into a xarray.DataArray using to_dask():

da = entry.to_dask()

Development

The master branch contains the last versioned release, and the development branch contains the latest version of the code. New Pull Requests should be made to the development branch. For additional contributing guidelines see the documentation.

Running the tests

To run the tests some additional packages need to be installed from the requirements-dev.txt file.

$ pip install -r requirements-dev.txt
$ pytest -v -s --cov intake-stac --cov-report term-missing

About

intake-stac was created as part of the Pangeo initiative. See the initial design document.