iocbio.sparks 1.6.1

IOCBio Sparks: Semi-automatic calcium sparks detection software

Semi-automatic calcium sparks detection software

IOCBIO Sparks is a cross-platform application for analysis and detection of calcium sparks when imaged using confocal microscope line scanning mode.

IOCBIO Sparks is a free software released under the GNU General Public License (GPL), see the file LICENSE for details.

See IOCBIO Sparks homepage for brief description, links and installation instructions.

Citations and software description

Software is described in a paper published in PeerJ (see below) that gives a background information regarding use of the software and shows an example analysis of sparks. Please cite this paper if you use the software.

Laasmaa, M., Karro, N., Birkedal, R., & Vendelin, M. (2019). IOCBIO Sparks detection and analysis software. PeerJ, 7, e6652 https://doi.org/10.7717/peerj.6652

Releases

All releases are listed at Releases. Releases are distributed as executable (for Windows) and through The Python Package Index (PyPI).

Copyright

Copyright (C) 2018 Laboratory of Systems Biology, Department of Cybernetics, School of Science, Tallinn University of Technology.

Authors:

• Martin Laasmaa [e-mail]
• Marko Vendelin [e-mail]

Software license: the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. See LICENSE for details