Overview
TotalVariation algorithms. itkProxTVImageFilter provides a wrap for the external project proxTV: https://github.com/albarji/proxTV
ITK provides wrapping for Windows, macOS and Linux:
import itk
Dimension = 3
I = itk.Image[itk.F, Dimension]
reader = itk.ImageFileReader[I].New(FileName=file_name)
reader.Update()
image = reader.GetOutput()
tv = itk.ProxTVImageFilter[I, I].New()
tv.SetInput(image)
tv.SetMaximumNumberOfIterations(10)
tv.SetWeights(100)
tv.Update()
output_file_name="/tmp/tvout.nrrd"
itk.imwrite(tv.GetOutput(), output_file_name)Examples of 3D image denoised
Original:
TotalVariation denoised:
Original:
Denoised:
Installation
To install the binary Python packages:
python -m pip install itk-totalvariation
Since ITK 5.0.0, this module is available in the ITK source tree as a remote module. To enable it, set:
Module_TotalVariation:BOOL=ON
in ITK’s CMake build configuration.
License
This software is distributed under the Apache 2.0 license. Please see the LICENSE file for details.
Release files for itk-totalvariation 1.0.1
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Built distributions (wheels)
Total release size: 35.0 MB
Release files / itk_totalvariation-1.0.1-cp311-abi3-win_amd64.whl
| Download URL | itk_totalvariation-1.0.1-cp311-abi3-win_amd64.whl |
|---|---|
| Size | 547.0 kB |
| Tags | CPython 3.11 Windows x86-64 abi3 |
|
SHA-256 checksum How to use checksums |
bac30c28ac0afdea0c112f7ea3619f9fe8d231efb19c91ef09869cecaa3ae125
|
|
BLAKE2b-256 checksum How to use checksums |
4fa3680cee5d9411d5ef5c6ddcce8797de082ce8aded027c558866927b234b71
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp311-abi3-manylinux_2_28_x86_64.whl
| Download URL | itk_totalvariation-1.0.1-cp311-abi3-manylinux_2_28_x86_64.whl |
|---|---|
| Size | 2.3 MB |
| Tags | CPython 3.11 Linux glibc 2.28+ x86-64 abi3 |
|
SHA-256 checksum How to use checksums |
c077f15cc66001ef751390586d9e410ee55b52d4db55975149bfb740f9c6e4ea
|
|
BLAKE2b-256 checksum How to use checksums |
a0e39dd16e817e756bda4e3ed3c43ec7e8baeba7643ce000c4868a6001859aa6
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp311-abi3-manylinux_2_28_aarch64.whl
| Download URL | itk_totalvariation-1.0.1-cp311-abi3-manylinux_2_28_aarch64.whl |
|---|---|
| Size | 2.1 MB |
| Tags | CPython 3.11 Linux glibc 2.28+ ARM64 abi3 |
|
SHA-256 checksum How to use checksums |
985916efc43c8aa932e3b7798176d5de3ad7ea2ade4d19a85abd5a7023483209
|
|
BLAKE2b-256 checksum How to use checksums |
be4da1ca7e1cca55c8bf86a759da94d86b69c4de14efb542ea802e25e45d8416
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp311-abi3-manylinux_2_17_x86_64.whl
| Download URL | itk_totalvariation-1.0.1-cp311-abi3-manylinux_2_17_x86_64.whl |
|---|---|
| Size | 684.8 kB |
| Tags | CPython 3.11 Linux glibc 2.17+ x86-64 abi3 |
|
SHA-256 checksum How to use checksums |
c4b9a95bf0eff948489aec5546377ae17b587eab4014b6b9af1a3d0056a155a9
|
|
BLAKE2b-256 checksum How to use checksums |
1b4bd6c2b8d814f1b6397fcc6f5ac750e4b5e8eabd4d166b7e80eb003d73c505
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp311-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
| Download URL | itk_totalvariation-1.0.1-cp311-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl |
|---|---|
| Size | 2.3 MB |
| Tags | CPython 3.11 Linux glibc 2.17+ x86-64 abi3 |
|
SHA-256 checksum How to use checksums |
343305a53f64378f17a53831314aea543e4397cd12e3698a469f79ca0521456c
|
|
BLAKE2b-256 checksum How to use checksums |
7d9a8e78635345f9120281b718b99f27a631c887bbd22cbffa6dffd1d2ed5dd9
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp311-abi3-macosx_11_0_arm64.whl
| Download URL | itk_totalvariation-1.0.1-cp311-abi3-macosx_11_0_arm64.whl |
|---|---|
| Size | 436.2 kB |
| Tags | CPython 3.11 abi3 macOS 11.0+ ARM64 |
|
SHA-256 checksum How to use checksums |
af92558147d4e4dc8e7a5910ac26d688f75d5aa43789f3424254e276f75ed3d2
|
|
BLAKE2b-256 checksum How to use checksums |
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|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp311-abi3-macosx_10_9_x86_64.whl
| Download URL | itk_totalvariation-1.0.1-cp311-abi3-macosx_10_9_x86_64.whl |
|---|---|
| Size | 555.2 kB |
| Tags | CPython 3.11 abi3 macOS 10.9+ x86-64 |
|
SHA-256 checksum How to use checksums |
469b4b610b5f332b722eb58caa245a43bb1e7777916800bacdc90d4b32acc91c
|
|
BLAKE2b-256 checksum How to use checksums |
b43fb8d7daf263b7ea9f7501e6c7e0dbba5beaa97352a0e41aa1880a9cbbb966
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp310-cp310-win_amd64.whl
| Download URL | itk_totalvariation-1.0.1-cp310-cp310-win_amd64.whl |
|---|---|
| Size | 547.3 kB |
| Tags | CPython 3.10 Windows x86-64 |
|
SHA-256 checksum How to use checksums |
8f0891e69b577fa3a74688066813c6185fb6bc8fdb23449b63eced9c60872777
|
|
BLAKE2b-256 checksum How to use checksums |
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|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp310-cp310-manylinux_2_28_x86_64.whl
| Download URL | itk_totalvariation-1.0.1-cp310-cp310-manylinux_2_28_x86_64.whl |
|---|---|
| Size | 2.3 MB |
| Tags | CPython 3.10 Linux glibc 2.28+ x86-64 |
|
SHA-256 checksum How to use checksums |
2f2bab0c3ce66ce3335bcd0efa1d4ef0563b78ee6b426f4649c0daeca1e9ca07
|
|
BLAKE2b-256 checksum How to use checksums |
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|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp310-cp310-manylinux_2_28_aarch64.whl
| Download URL | itk_totalvariation-1.0.1-cp310-cp310-manylinux_2_28_aarch64.whl |
|---|---|
| Size | 2.1 MB |
| Tags | CPython 3.10 Linux glibc 2.28+ ARM64 |
|
SHA-256 checksum How to use checksums |
6d81a1459707f8e8661dd893a308b39579232eee3469bc78af8b923526ab9da3
|
|
BLAKE2b-256 checksum How to use checksums |
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|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp310-cp310-manylinux_2_17_x86_64.whl
| Download URL | itk_totalvariation-1.0.1-cp310-cp310-manylinux_2_17_x86_64.whl |
|---|---|
| Size | 688.0 kB |
| Tags | CPython 3.10 Linux glibc 2.17+ x86-64 |
|
SHA-256 checksum How to use checksums |
5a5604626ce264d13185fe667bcabc0c8fcbc6e0e47f49a1edb2df95187f6fa0
|
|
BLAKE2b-256 checksum How to use checksums |
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|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
| Download URL | itk_totalvariation-1.0.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl |
|---|---|
| Size | 2.3 MB |
| Tags | CPython 3.10 Linux glibc 2.17+ x86-64 |
|
SHA-256 checksum How to use checksums |
05f1a47175bef398705b0b569ec7315735656336082ace17f3ae1c94adfd52f4
|
|
BLAKE2b-256 checksum How to use checksums |
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|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp310-cp310-macosx_11_0_arm64.whl
| Download URL | itk_totalvariation-1.0.1-cp310-cp310-macosx_11_0_arm64.whl |
|---|---|
| Size | 435.0 kB |
| Tags | CPython 3.10 macOS 11.0+ ARM64 |
|
SHA-256 checksum How to use checksums |
b3869ddb7a4106eeedbaeb640f161fc382cad2c6173e9538ef5a117778727729
|
|
BLAKE2b-256 checksum How to use checksums |
db47220060adec4bfc2078152890ae43216b3396bb8f139cd09e39b780ac5810
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp310-cp310-macosx_10_9_x86_64.whl
| Download URL | itk_totalvariation-1.0.1-cp310-cp310-macosx_10_9_x86_64.whl |
|---|---|
| Size | 555.8 kB |
| Tags | CPython 3.10 macOS 10.9+ x86-64 |
|
SHA-256 checksum How to use checksums |
9611e809562cc30a1a888479578b27cb733b23649da8c01fa212af2c17da9e52
|
|
BLAKE2b-256 checksum How to use checksums |
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|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp39-cp39-win_amd64.whl
| Download URL | itk_totalvariation-1.0.1-cp39-cp39-win_amd64.whl |
|---|---|
| Size | 548.1 kB |
| Tags | CPython 3.9 Windows x86-64 |
|
SHA-256 checksum How to use checksums |
8fc83193df033e15b339dc69197c1ebe0c922d2b1bf977a403cff77a776c8af9
|
|
BLAKE2b-256 checksum How to use checksums |
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|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp39-cp39-manylinux_2_28_x86_64.whl
| Download URL | itk_totalvariation-1.0.1-cp39-cp39-manylinux_2_28_x86_64.whl |
|---|---|
| Size | 2.3 MB |
| Tags | CPython 3.9 Linux glibc 2.28+ x86-64 |
|
SHA-256 checksum How to use checksums |
43af627a1b6552041b17522347e177ea24afa918eae82e985deac413b49055e0
|
|
BLAKE2b-256 checksum How to use checksums |
e70efee674bbeb9fa60c15ecec56b9ff1410168ac6eb997c713e83dffa73cbc1
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp39-cp39-manylinux_2_28_aarch64.whl
| Download URL | itk_totalvariation-1.0.1-cp39-cp39-manylinux_2_28_aarch64.whl |
|---|---|
| Size | 2.1 MB |
| Tags | CPython 3.9 Linux glibc 2.28+ ARM64 |
|
SHA-256 checksum How to use checksums |
1e6f6cb8bfa69b8891391cd2dae9031bdf343bd6e232d26b916bcaf021daf51d
|
|
BLAKE2b-256 checksum How to use checksums |
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|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp39-cp39-manylinux_2_17_x86_64.whl
| Download URL | itk_totalvariation-1.0.1-cp39-cp39-manylinux_2_17_x86_64.whl |
|---|---|
| Size | 687.9 kB |
| Tags | CPython 3.9 Linux glibc 2.17+ x86-64 |
|
SHA-256 checksum How to use checksums |
cf0503bba1242186e9793b44d5fd2a79a910caf2ac68cba31ec90d34ba8189c5
|
|
BLAKE2b-256 checksum How to use checksums |
a1251b7d84f1adc978d691a049a9b4d0dcbb5b138480b621c0c65b697cf62fab
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
| Download URL | itk_totalvariation-1.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl |
|---|---|
| Size | 2.3 MB |
| Tags | CPython 3.9 Linux glibc 2.17+ x86-64 |
|
SHA-256 checksum How to use checksums |
38c5f3fa5bf4493c7209932c6f55cdf2aac9c0f5f0f9de76a7668136626a2a68
|
|
BLAKE2b-256 checksum How to use checksums |
1b76189d57a9573f18d6a0ceec40d9a2a768bcc8c93aaec2f759e5d316de8181
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp39-cp39-macosx_11_0_arm64.whl
| Download URL | itk_totalvariation-1.0.1-cp39-cp39-macosx_11_0_arm64.whl |
|---|---|
| Size | 435.0 kB |
| Tags | CPython 3.9 macOS 11.0+ ARM64 |
|
SHA-256 checksum How to use checksums |
b767b3443565233eca1c05d9a12f63f2176b0795b12c575ded13fa22d7b6d679
|
|
BLAKE2b-256 checksum How to use checksums |
a28f8dab981ed523b8ac06147a13ff04b8b429e4f1a2e305f265a94e2972b57e
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp39-cp39-macosx_10_9_x86_64.whl
| Download URL | itk_totalvariation-1.0.1-cp39-cp39-macosx_10_9_x86_64.whl |
|---|---|
| Size | 555.8 kB |
| Tags | CPython 3.9 macOS 10.9+ x86-64 |
|
SHA-256 checksum How to use checksums |
9f798af7c81e11f884be61a80dd592884f015489264cdcecf0b2141ac155b036
|
|
BLAKE2b-256 checksum How to use checksums |
fcb165ab6099959d64376e8966eb6b92a725af30a2001f0c6a110f2b486ba153
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp38-cp38-win_amd64.whl
| Download URL | itk_totalvariation-1.0.1-cp38-cp38-win_amd64.whl |
|---|---|
| Size | 575.7 kB |
| Tags | CPython 3.8 Windows x86-64 |
|
SHA-256 checksum How to use checksums |
55b9859bd3b6e6d19218d4f9f18f76aacfe9b687cf1aa53ce45260e0ba86862c
|
|
BLAKE2b-256 checksum How to use checksums |
9d62714a2050fa3abab1a0a52962dbc92304ac47ab281bf239467785d5a38ca1
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp38-cp38-manylinux_2_28_x86_64.whl
| Download URL | itk_totalvariation-1.0.1-cp38-cp38-manylinux_2_28_x86_64.whl |
|---|---|
| Size | 2.3 MB |
| Tags | CPython 3.8 Linux glibc 2.28+ x86-64 |
|
SHA-256 checksum How to use checksums |
971e91071f4fdbfbf396052dc01839288c8a704470314bb20b50bf9651b25392
|
|
BLAKE2b-256 checksum How to use checksums |
feb5c27a135183e5fa347fc3a8a6ce277201b34d5d47b73f8fe4d15961fc4324
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp38-cp38-manylinux_2_28_aarch64.whl
| Download URL | itk_totalvariation-1.0.1-cp38-cp38-manylinux_2_28_aarch64.whl |
|---|---|
| Size | 2.1 MB |
| Tags | CPython 3.8 Linux glibc 2.28+ ARM64 |
|
SHA-256 checksum How to use checksums |
52f2ddd09c8ddfd00d99c7230f775e2bd041946f65089abb7c668e9dde4b54ae
|
|
BLAKE2b-256 checksum How to use checksums |
368874e9bb2d4d6077607e59380282d2b21f2fbbeaa5bb9f7a4abd207b8473b7
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp38-cp38-manylinux_2_17_x86_64.whl
| Download URL | itk_totalvariation-1.0.1-cp38-cp38-manylinux_2_17_x86_64.whl |
|---|---|
| Size | 687.9 kB |
| Tags | CPython 3.8 Linux glibc 2.17+ x86-64 |
|
SHA-256 checksum How to use checksums |
3d3b249a465093be75c425fb2806e5e430fad0dd49bd020b96ef0350932d2f13
|
|
BLAKE2b-256 checksum How to use checksums |
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|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/5.1.1 CPython/3.9.19
|
Release files / itk_totalvariation-1.0.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
| Download URL | itk_totalvariation-1.0.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl |
|---|---|
| Size | 2.3 MB |
| Tags | CPython 3.8 Linux glibc 2.17+ x86-64 |
|
SHA-256 checksum How to use checksums |
6097069bbd83c1d73c83f56f98dc646a9d7fa4ddbc1374f3aa3f5b2878668a97
|
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BLAKE2b-256 checksum How to use checksums |
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twine/5.1.1 CPython/3.9.19
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Release files / itk_totalvariation-1.0.1-cp38-cp38-macosx_10_9_x86_64.whl
| Download URL | itk_totalvariation-1.0.1-cp38-cp38-macosx_10_9_x86_64.whl |
|---|---|
| Size | 555.7 kB |
| Tags | CPython 3.8 macOS 10.9+ x86-64 |
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SHA-256 checksum How to use checksums |
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twine/5.1.1 CPython/3.9.19
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