Skip to main content

Feature conditioning for IVADO medical imaging project.

Project description

ivadomed Overview

DOI Coverage Status test status publish package Documentation Status License: MIT Twitter Follow

ivadomed is an integrated framework for medical image analysis with deep learning.

The technical documentation is available here. The more detailed installation instruction is available there

Installation

ivadomed requires Python >= 3.6 and < 3.10 as well as PyTorch == 1.8. We recommend working under a virtual environment, which could be set as follows:

python -m venv ivadomed_env
source ivadomed_env/bin/activate

Install from release (recommended)

Install ivadomed and its requirements from Pypi <https://pypi.org/project/ivadomed/>__:

pip install --upgrade pip
pip install ivadomed

Install from source

Bleeding-edge developments builds are available on the project's master branch on Github. Installation procedure is the following:

git clone https://github.com/neuropoly/ivadomed.git
cd ivadomed
pip install -e .

Install from source

Make sure to install Torch1.8 following commands here as pip is not able to auto infer GPU/CPU support on your behalf. Again, the more comprehensive installation instruction is available there.

Contributors

This project results from a collaboration between the NeuroPoly Lab and the Mila. The main funding source is IVADO.

List of contributors

Consult our Wiki(https://github.com/ivadomed/ivadomed/wiki) here for more help

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

ivadomed-2.9.1.tar.gz (169.8 kB view hashes)

Uploaded Source

Built Distribution

ivadomed-2.9.1-py3-none-any.whl (217.3 kB view hashes)

Uploaded Python 3

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page