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An interactive visual shell for phylogenetics

Project Description

ivy is a lightweight library and an interactive visual programming environment for phylogenetics. It is built on a powerful foundation of open-source software components, including numpy, scipy, matplotlib, and IPython.

ivy emphasizes interactive, exploratory visualization of phylogenetic trees. For example:

#!/usr/bin/env ipython
from ivy.interactive import *

root = readtree("primates.newick")
fig = treefig(root)

Documentation and other resources

http://www.reelab.net/ivy

Installation

  1. Install virtualenv.
  2. Install ivy: pip install ivy
Release History

Release History

This version
History Node

20120228

History Node

20111004

History Node

20110930

History Node

20110601

History Node

20110510

History Node

20110405

Download Files

Download Files

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File Name & Checksum SHA256 Checksum Help Version File Type Upload Date
ivy-phylo-20120228.tar.gz (68.5 kB) Copy SHA256 Checksum SHA256 Source Feb 29, 2012

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