Bioinformatics tools for Janis; the Pipeline creation helper
Project description
Janis - Bioinformatics
This repository contains tools and data types for Janis directly related to the bioinformatics field.
Refer to the documentation.
Data types
The data types are a way of encapsulating information about the file (including secondary files), and it allows clarity when connecting inputs and steps together (as you know a BAM file should be connected to BAM input).
Documentation
Documentation is generated on Janis. To generate new documentation you will need to:
- Commit your changes here,
- Update the submodule pointer on Janis,
- Checkout Janis (recursively),
- Run the regenerate script
janis/docs/regeneratedocumentation.py
, - Commit these changes and the documentation will autobuild on ReadTheDocs.
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Close
Hashes for janis-pipelines.bioinformatics-0.5.0.tar.gz
Algorithm | Hash digest | |
---|---|---|
SHA256 | a9928baa293ec24a877382ab6f3f3a24f6ae7997480663f2a3e8e07322a22c17 |
|
MD5 | 05b31edd285bcc424af795fc41acc19d |
|
BLAKE2b-256 | 3cb34b0a07fe867af9862b57e2afeb7e60d443acbbb7b0762f03a28e3af6dfae |
Close
Hashes for janis_pipelines.bioinformatics-0.5.0-py3-none-any.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | d8cf3c06dfd09c77ab0922c21f3c40918294f80f266a334401c22af07623dfd9 |
|
MD5 | 53ec0d9b371ac149584e2350340cc753 |
|
BLAKE2b-256 | 87c471ce15ceae9f982ebd9cb38c3917e2ed0c8ea8a5df3c2916a1c6e454e97d |