Bioinformatics tools for Janis; the Pipeline creation helper
Project description
Janis - Bioinformatics
This repository contains tools and data types for Janis directly related to the bioinformatics field.
Refer to the documentation.
Data types
The data types are a way of encapsulating information about the file (including secondary files), and it allows clarity when connecting inputs and steps together (as you know a BAM file should be connected to BAM input).
Documentation
Documentation is generated on Janis. To generate new documentation you will need to:
- Commit your changes here,
- Update the submodule pointer on Janis,
- Checkout Janis (recursively),
- Run the regenerate script
janis/docs/regeneratedocumentation.py
, - Commit these changes and the documentation will autobuild on ReadTheDocs.
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Close
Hashes for janis-pipelines.bioinformatics-0.5.1.tar.gz
Algorithm | Hash digest | |
---|---|---|
SHA256 | 672d69cd03e5bca868c52de8d4f69d065b169e2702f66456b695624ae13e9150 |
|
MD5 | 712a8bfbf6b1393a17b5f5a0319ff069 |
|
BLAKE2b-256 | 276182c7f39f98d58cb78f582ff7e245a06bd81d87441f563a56b35f8569f65b |
Close
Hashes for janis_pipelines.bioinformatics-0.5.1-py3-none-any.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 6cb9dc941498a965c3024d1ce57043e8935cdee28a93bb95637cbc9affff82d0 |
|
MD5 | 089e3a350b604d14ec7d69ed1d9257b6 |
|
BLAKE2b-256 | 8525782700d2f00646b010abc3c6fcd2063d470f494fcf6f480e2d8d43039755 |